Research Interests
Development and application of new training methods for eukaryotic gene prediction,
Genome annotation,
Post annotatoin analysis
Education
Ph.D., Bioinformatics, School of Biology,
Georgia Institute of Technology, 2008
M.S., Chemical Engineering, The State Engineering University of Armenia, 1998
B.S., Chemichal Engineering The State Engineering University of Armenia, 1996
Publications
Ter-Hovhannisyan V., Lomsadze A., Chernoff Y. and Borodovsky M., "Gene prediction in novel fungal genomes by ab initio algorithm with unsupervised training", Genome Research, 2008, 18(12):1979-90. Article
Lomsadze A., Ter-Hovhannisyan V., Chernoff Y. and Borodovsky M.,
"Gene identification in novel eukaryotic genomes by self-training algorithm", Nucleic Acids Research, 2005, Vol. 33, No. 20, 6494-6506. Article
Ter-Hovhannisyan V., Lomsadze A., and Borodovsky M., "Gene finding in genomes with small number of introns", in preparation
Teaching
Ph.D. thesis
Personal
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links
GeneMark
web
download
papers on gene finding
AWK
tutorial 1
tutorial 2
Genomes Online Database
Bioinformatics tools solving linguistics problem
tools
NCBI
Phylogenetic tree printer
clustalw2
protected
my scripts
On-line Books
Biological sequenceanalysis
Problems and solutions inbiological sequenceanalysis
Misc
Linkedin
HMM toy example
PhD forum
Ph.D. comics
Video
Mel Brooks History of the world-
Last Supper
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