GeneMark
TM
for MetaGenomes Analysis
BETA | Heuristic 2009
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Gene Prediction in Metagenomes and Novel Prokaryotes by Heuristic Approach
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The program is in Beta testing, please !
Reference:
TBA,
[
PDF TBA
]
Input Sequence(s)
?
Title:
Sequence(s) in FASTA format: (
Demo
,
Clear
)
or upload a sequence file:
Program options
?
Kingdom:
Bacteria only
Archaea only
Mixture of bacteria and archaea
Model selection:
Codon frequencies by 3rd order polynomial fitting
Triplets frequencies by multiple regressions on G+C content and growth temperature
Optimal growth temperature: (Effective only when the model "Triplets with G+C content and Growth Temperature" is chosen.)
Mesophilic
Thermophilic
HyperThermophilic
I know the Exact temperature, please specify: (in Celcius)
Output Options
?
Format:
GFF3
GeneMark.hmm
Nucleotide sequences of predicted genes
Translate predicted genes into proteins
Enter your Email address to get notification when prediction run is complete
Email Address:
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GeneMark